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LOC9272211 uncharacterized protein At4g14342 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 9272211, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9272211
Gene description
uncharacterized protein At4g14342
Locus tag
OSNPB_080278966
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC9272211 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (10818015..10821503)

Chromosome 8 - NC_029263.1Genomic Context describing neighboring genes Neighboring gene succinate dehydrogenase assembly factor 1, mitochondrial Neighboring gene stromal cell-derived factor 2-like protein Neighboring gene two-component response regulator ORR32-like Neighboring gene two-component response regulator ORR33-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029263.1 Chromosome 8 Reference IRGSP-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U2 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein At4g14342
Names
Os08g0278966

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029263.1 Reference IRGSP-1.0 Primary Assembly

    Range
    10818015..10821503
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015793031.2 → XP_015648517.1  uncharacterized protein At4g14342

    UniProtKB/TrEMBL
    A0A0P0XE29, A3BTL4
    Conserved Domains (1) summary
    pfam07189
    Location:5 → 79
    SF3b10; Splicing factor 3B subunit 10 (SF3b10)
Nucleotide Protein
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