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LOC9268688 uncharacterized LOC9268688 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 9268688, updated on 1-Aug-2024

Summary

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Gene symbol
LOC9268688
Gene description
uncharacterized LOC9268688
Locus tag
OSNPB_100203600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Expression
Ubiquitous expression in leaves before flowering (RPKM 4.3), flower buds (RPKM 4.2) and 6 other tissues See more
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Genomic context

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Location:
chromosome: 10
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (7548599..7557966)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (7385694..7395734)

Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4348261 Neighboring gene uncharacterized calcium-binding protein At1g02270 Neighboring gene uncharacterized LOC136353596 Neighboring gene probable E3 ubiquitin-protein ligase LOG2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC9268688
Names
Os10g0203600

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

    Range
    7548599..7557966
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015757469.3 → XP_015612955.2  uncharacterized protein LOC9268688

    UniProtKB/TrEMBL
    A0A0P0XSI7
Nucleotide Protein
Heading Accession and Version

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