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GSTUM_00010751001 uncharacterized protein [ Tuber melanosporum (Perigord truffle) ]

Gene ID: 9182161, updated on 11-Apr-2024

Summary

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Gene symbol
GSTUM_00010751001
Gene description
uncharacterized protein
Locus tag
GSTUM_00010751001
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Tuber melanosporum (strain: Mel28)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Pezizomycetes; Pezizales; Tuberaceae; Tuber
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Genomic context

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See GSTUM_00010751001 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_003299122.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003299122.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis. Martin F, et al. Nature, 2010 Apr 15. PMID 20348908

GeneRIFs: Gene References Into Functions

General gene information

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Homology

5'UTR

  • Loc: 355257-355323

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polynucleotide 5'-hydroxyl-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mRNA cleavage factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003299122.1 Reference assembly

    Range
    355257..356980
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002841498.2 → XP_002841544.1  uncharacterized protein GSTUM_00010751001 [Tuber melanosporum]

    See identical proteins and their annotated locations for XP_002841544.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D5GMJ2
    Conserved Domains (4) summary
    COG5623
    Location:38 → 474
    CLP1; Predicted GTPase subunit of the pre-mRNA cleavage complex [Translation, ribosomal structure and biogenesis]
    pfam06807
    Location:357 → 474
    Clp1; Pre-mRNA cleavage complex II protein Clp1
    pfam16573
    Location:36 → 127
    CLP1_N; N-terminal beta-sandwich domain of polyadenylation factor
    pfam16575
    Location:142 → 348
    CLP1_P; mRNA cleavage and polyadenylation factor CLP1 P-loop
Nucleotide Protein
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