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GSTUM_00009562001 uncharacterized protein [ Tuber melanosporum (Perigord truffle) ]

Gene ID: 9182038, updated on 23-Nov-2023

Summary

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Gene symbol
GSTUM_00009562001
Gene description
uncharacterized protein
Locus tag
GSTUM_00009562001
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Tuber melanosporum (strain: Mel28)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Pezizomycetes; Pezizales; Tuberaceae; Tuber
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Genomic context

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See GSTUM_00009562001 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
16

NW_003299105.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003299105.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis. Martin F, et al. Nature, 2010 Apr 15. PMID 20348908

GeneRIFs: Gene References Into Functions

General gene information

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Homology

3'UTR

  • Loc: 50563-50694

5'UTR

  • Loc: 46638-46725

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent DNA damage sensor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mismatched DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mismatch repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reciprocal meiotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003299105.1 Reference assembly

    Range
    46638..50694
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002840782.2 → XP_002840828.1  uncharacterized protein GSTUM_00009562001 [Tuber melanosporum]

    See identical proteins and their annotated locations for XP_002840828.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D5GKH6
    Conserved Domains (5) summary
    smart00533
    Location:217 → 524
    MUTSd; DNA-binding domain of DNA mismatch repair MUTS family
    pfam05188
    Location:39 → 112
    MutS_II; MutS domain II
    pfam05190
    Location:375 → 467
    MutS_IV; MutS family domain IV
    pfam05192
    Location:197 → 282
    MutS_III; MutS domain III
    cl21455
    Location:516 → 736
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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