U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HVO_RS01535 IclR family transcriptional regulator [ Haloferax volcanii DS2 ]

Gene ID: 8919250, updated on 7-May-2024

Summary

Go to the top of the page Help
Gene symbol
HVO_RS01535
Gene description
IclR family transcriptional regulator
Locus tag
HVO_RS01535
Gene type
protein coding
Organism
Haloferax volcanii DS2 (strain: DS2, type-material: type strain of Halobacterium volcanii)
Lineage
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haloferacaceae; Haloferax
Old locus tag
HVO_B0320
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
plasmid: pHV3
Sequence:
NC_013964.1 (368668..369435, complement)

NC_013964.1Genomic Context describing neighboring genes Neighboring gene BMP family ABC transporter substrate-binding protein Neighboring gene IclR family transcriptional regulator Neighboring gene Gfo/Idh/MocA family oxidoreductase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_013964.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The complete genome sequence of Haloferax volcanii DS2, a model archaeon. Hartman AL, et al. PLoS One, 2010 Mar 19. PMID 20333302, Free PMC Article
  2. The IclR family of transcriptional activators and repressors can be defined by a single profile. Krell T, et al. Protein Sci, 2006 May. PMID 16597823, Free PMC Article
  3. Members of the IclR family of bacterial transcriptional regulators function as activators and/or repressors. Molina-Henares AJ, et al. FEMS Microbiol Rev, 2006 Mar. PMID 16472303
  4. The many faces of the helix-turn-helix domain: transcription regulation and beyond. Aravind L, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808743

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
IclR family transcriptional regulator

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013964.1 Reference assembly

    Range
    368668..369435 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_004041222.1 MULTISPECIES: IclR family transcriptional regulator [Haloferax]

    See identical proteins and their annotated locations for WP_004041222.1

    UniProtKB/TrEMBL
    A0A371KJW4, A0A384KTW3, A0A498E7W8, A0A498EJ10, A0A8T5CXV7, D4GPW7, L9VKU4, M0FMC3, M0FNZ6, M0GJ42
    Conserved Domains (1) summary
    COG1414
    Location:17 → 252
    IclR; DNA-binding transcriptional regulator, IclR family [Transcription]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.