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amiB N-acetylmuramoyl-L-alanine amidase [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 878469, updated on 4-Apr-2024

Summary

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Gene symbol
amiB
Gene description
N-acetylmuramoyl-L-alanine amidase
Locus tag
PA4947
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (5551681..5553108, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene tRNA delta(2)-isopentenylpyrophosphate transferase Neighboring gene DNA mismatch repair protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The cell wall amidase AmiB is essential for Pseudomonas aeruginosa cell division, drug resistance and viability. Yakhnina AA, et al. Mol Microbiol, 2015 Sep. PMID 26032134, Free PMC Article
  2. Production and purification of the bacterial autolysin N-acetylmuramoyl-L-alanine amidase B from Pseudomonas aeruginosa. Scheurwater EM, et al. Protein Expr Purif, 2007 Nov. PMID 17723308
  3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Results revealed a key role for amidase activity in cytokinetic ring contraction. AmiB was found to be essential for viability and the successful completion of cell constriction.
    Title: The cell wall amidase AmiB is essential for Pseudomonas aeruginosa cell division, drug resistance and viability.
  2. The gene encoding N-acetylmuramoyl-L-alanine amidase B in Pseudomonas aeruginosa was cloned and over-expressed in Escherichia coli.
    Title: Production and purification of the bacterial autolysin N-acetylmuramoyl-L-alanine amidase B from Pseudomonas aeruginosa.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
N-acetylmuramoyl-L-alanine amidase
NP_253634.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    5551681..5553108 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_253634.1 N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_253634.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AA87TWB2
    Conserved Domains (2) summary
    cd00118
    Location:424 → 467
    LysM; Lysin Motif is a small domain involved in binding peptidoglycan
    PRK10431
    Location:5 → 408
    PRK10431; N-acetylmuramoyl-l-alanine amidase II; Provisional
Nucleotide Protein
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