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cct7 chaperonin containing TCP1 eta subunit [ Dictyostelium discoideum AX4 ]

Gene ID: 8628119, updated on 17-May-2024

Summary

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Gene symbol
cct7
Gene description
chaperonin containing TCP1 eta subunit
Primary source
dictyBase:DDB_G0291225
Locus tag
DDB_G0291225
See related
AmoebaDB:DDB_G0291225; VEuPathDB:DDB_G0291225
Gene type
protein coding
RNA name
chaperonin containing TCP1 eta subunit
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0183853; DDBDRAFT_0191096; DDB_0183853; DDB_0191096
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Genomic context

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Location:
chromosome: 6
Exon count:
2
Sequence:
Chromosome: 6; NC_007092.3 (201367..203505)

Chromosome 6 - NC_007092.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene transmembrane protein Neighboring gene ARD/ARD' family protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007092.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
  
enables molecular_function ND
No biological Data available
more info
  
enables unfolded protein binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in protein folding IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of chaperonin-containing T-complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of chaperonin-containing T-complex ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Names
chaperonin containing TCP1 eta subunit

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007092.3 Reference assembly

    Range
    201367..203505
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_630081.1 → XP_635173.1  chaperonin containing TCP1 eta subunit [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_635173.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q54ER7
    Conserved Domains (2) summary
    cd03340
    Location:8 → 525
    TCP1_eta; TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), ...
    TIGR02345
    Location:6 → 525
    chap_CCT_eta; T-complex protein 1, eta subunit
Nucleotide Protein
Heading Accession and Version

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