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leo1 RNA polymerase II complex component [ Dictyostelium discoideum AX4 ]

Gene ID: 8625427, updated on 17-May-2024

Summary

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Gene symbol
leo1
Gene description
RNA polymerase II complex component
Primary source
dictyBase:DDB_G0286051
Locus tag
DDB_G0286051
See related
AmoebaDB:DDB_G0286051; VEuPathDB:DDB_G0286051
Gene type
protein coding
RNA name
RNA polymerase II complex component
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0186792; DDBDRAFT_0267056; DDB_0186792; DDB_0267056
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_007090.3 (3999753..4001300, complement)

Chromosome 4 - NC_007090.3Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol glycan, class W Neighboring gene zinc transporter Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007090.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables RNA polymerase II C-terminal domain phosphoserine binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in positive regulation of transcription elongation by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of Cdc73/Paf1 complex IEA
Inferred from Electronic Annotation
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Names
RNA polymerase II complex component

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007090.3 Reference assembly

    Range
    3999753..4001300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_632824.1 → XP_637916.1  RNA polymerase II complex component [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_637916.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q54MB8
    Conserved Domains (1) summary
    pfam04004
    Location:185 → 330
    Leo1; Leo1-like protein
Nucleotide Protein
Heading Accession and Version

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