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DDB_G0285897 type I phosphodiesterase/nucleotide pyrophosphatase family protein [ Dictyostelium discoideum AX4 ]

Gene ID: 8625343, updated on 17-May-2024

Summary

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Gene symbol
DDB_G0285897
Gene description
type I phosphodiesterase/nucleotide pyrophosphatase family protein
Primary source
dictyBase:DDB_G0285897
Locus tag
DDB_G0285897
See related
AmoebaDB:DDB_G0285897; VEuPathDB:DDB_G0285897
Gene type
protein coding
RNA name
type I phosphodiesterase/nucleotide pyrophosphatase family protein
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0186737; DDBDRAFT_0232174; DDB_0186737; DDB_0232174
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_007090.3 (3798877..3800675)

Chromosome 4 - NC_007090.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene EXS domain-containing protein Neighboring gene alanine aminotransferase Neighboring gene Vps53-like domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007090.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphate-containing compound metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Names
type I phosphodiesterase/nucleotide pyrophosphatase family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007090.3 Reference assembly

    Range
    3798877..3800675
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_632900.1 → XP_637992.1  type I phosphodiesterase/nucleotide pyrophosphatase family protein [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_637992.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q54MJ8
    Conserved Domains (2) summary
    pfam01663
    Location:175 → 502
    Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
    cd16018
    Location:174 → 546
    Enpp; Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q54MJ8.1

Gene LinkOut

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