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bcaA branched-chain amino acid aminotransferase [ Dictyostelium discoideum AX4 ]

Gene ID: 8625144, updated on 17-May-2024

Summary

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Gene symbol
bcaA
Gene description
branched-chain amino acid aminotransferase
Primary source
dictyBase:DDB_G0285509
Locus tag
DDB_G0285509
See related
AmoebaDB:DDB_G0285509; VEuPathDB:DDB_G0285509
Gene type
protein coding
RNA name
branched-chain amino acid aminotransferase
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0186538; DDBDRAFT_0230183; DDB_0186538; DDB_0230183
NEW
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_007090.3 (3329709..3330998)

Chromosome 4 - NC_007090.3Genomic Context describing neighboring genes Neighboring gene inositol-3-phosphate synthase Neighboring gene pre-mRNA cleavage complex subunit Neighboring gene hypothetical protein Neighboring gene anti-silencing protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007090.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables L-isoleucine transaminase activity IEA
Inferred from Electronic Annotation
more info
  
enables L-leucine transaminase activity IEA
Inferred from Electronic Annotation
more info
  
enables L-leucine:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables L-valine transaminase activity IEA
Inferred from Electronic Annotation
more info
  
enables branched-chain-amino-acid transaminase activity IEA
Inferred from Electronic Annotation
more info
  
enables branched-chain-amino-acid transaminase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables transaminase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in amino acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in branched-chain amino acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within branched-chain amino acid biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in branched-chain amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Names
branched-chain amino acid aminotransferase
branched-chain-amino-acid transaminase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007090.3 Reference assembly

    Range
    3329709..3330998
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_633004.1 → XP_638096.1  branched-chain amino acid aminotransferase [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_638096.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q54N47
    Conserved Domains (2) summary
    PRK13357
    Location:31 → 368
    PRK13357; branched-chain amino acid aminotransferase; Provisional
    cd01557
    Location:72 → 367
    BCAT_beta_family; BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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