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DDB_G0273473 hypothetical protein [ Dictyostelium discoideum AX4 ]

Gene ID: 8618953, updated on 17-May-2024

Summary

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Gene symbol
DDB_G0273473
Gene description
hypothetical protein
Primary source
dictyBase:DDB_G0273473
Locus tag
DDB_G0273473
See related
AmoebaDB:DDB_G0273473; VEuPathDB:DDB_G0273473
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0217150; DDBDRAFT_0237526; DDB_0217150; DDB_0237526
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Genomic context

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Location:
chromosome: 2
Exon count:
7
Sequence:
Chromosome: 2; NC_007088.5 (2922562..2926126, complement)

Chromosome 2 - NC_007088.5Genomic Context describing neighboring genes Neighboring gene dipeptidyl-peptidase III Neighboring gene heat shock protein Hsp20 domain-containing protein Neighboring gene HisK family protein kinase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007088.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of Dictyostelium discoideum. Glöckner G, et al. Nature, 2002 Jul 4. PMID 12097910
  2. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in endocytic recycling IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
  
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
is_active_in endosome IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in endosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007088.5 Reference assembly

    Range
    2922562..2926126 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_639497.1 → XP_644589.1  hypothetical protein DDB_G0273473 [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_644589.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q557H3, Q86AU0
    Conserved Domains (1) summary
    pfam03635
    Location:540 → 701
    Vps35; Vacuolar protein sorting-associated protein 35
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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