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ECU08_0550 arginyl-tRNA synthetase [ Encephalitozoon cuniculi GB-M1 ]

Gene ID: 859606, updated on 17-May-2024

Summary

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Gene symbol
ECU08_0550
Gene description
arginyl-tRNA synthetase
Primary source
MicrosporidiaDB:ECU08_0550
Locus tag
ECU08_0550
See related
VEuPathDB:ECU08_0550
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Encephalitozoon cuniculi GB-M1 (isolate: GB-M1)
Lineage
Eukaryota; Fungi; Fungi incertae sedis; Microsporidia; Unikaryonidae; Encephalitozoon
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Genomic context

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See ECU08_0550 in Genome Data Viewer
Location:
chromosome: VIII
Exon count:
1
Sequence:
Chromosome: VIII; NC_003235.1 (64736..66427, complement)

Chromosome VIII - NC_003235.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003235.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of transcriptional signals in Encephalitozoon cuniculi widespread among Microsporidia phylum: support for accurate structural genome annotation. Peyretaillade E, et al. BMC Genomics, 2009 Dec 15. PMID 20003517, Free PMC Article
  2. Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi. Katinka MD, et al. Nature, 2001 Nov 22. PMID 11719806

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables arginine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arginyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arginyl-tRNA synthetase
NP_597184.1
  • 08_0550, ARGINYL tRNA SYNTHETASE, SYRC_YEAST, gene found by Glimmer

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003235.1 Reference assembly

    Range
    64736..66427 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001041793.1 → NP_597184.1  arginyl-tRNA synthetase [Encephalitozoon cuniculi GB-M1]

    See identical proteins and their annotated locations for NP_597184.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q8SRD8
    UniProtKB/TrEMBL
    M1K2M9
    Conserved Domains (3) summary
    COG0018
    Location:1 → 563
    ArgS; Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
    cl00015
    Location:113 → 368
    nt_trans; nucleotidyl transferase superfamily
    cl12020
    Location:407 → 563
    Anticodon_Ia_like; Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8SRD8.1

Gene LinkOut

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Molecular Biology Databases
Research Materials