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Cbr-ife-2.1 Protein CBR-IFE-2.1 [ Caenorhabditis briggsae ]

Gene ID: 8585289, updated on 6-Jun-2024

Summary

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Gene symbol
Cbr-ife-2.1
Gene description
Protein CBR-IFE-2.1
Locus tag
CBG_08171
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Caenorhabditis briggsae (strain: AF16)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See Cbr-ife-2.1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
3
Sequence:
Chromosome: X; NC_013491.2 (592905..593775)

Chromosome X - NC_013491.2Genomic Context describing neighboring genes Neighboring gene Protein CBG08169 Neighboring gene Protein CBG08170 Neighboring gene Protein CBG08172 Neighboring gene Protein CBG08173

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013491.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. Stein LD, et al. PLoS Biol, 2003 Nov. PMID 14624247, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA 7-methylguanosine cap binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of eukaryotic translation initiation factor 4F complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein CBR-IFE-2.1
XP_002643295.1
  • C. briggsae CBR-IFE-2.1 protein; contains similarity to Pfam domain PF01652 Eukaryotic initiation factor 4E contains similarity to Interpro domains IPR001040 (Translation Initiation factor eIF- 4e), IPR019770 (Eukaryotic translation initiation factor 4E (eIF-4E), conserved site);
    Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013491.2 Reference assembly

    Range
    592905..593775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002643249.1 → XP_002643295.1  Protein CBR-IFE-2.1 [Caenorhabditis briggsae]

    See identical proteins and their annotated locations for XP_002643295.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAE9F4W3, A8X5Z5
    Conserved Domains (1) summary
    pfam01652
    Location:6 → 132
    IF4E; Eukaryotic initiation factor 4E
Nucleotide Protein
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