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CBG21034 Protein CBG21034 [ Caenorhabditis briggsae ]

Gene ID: 8573812, updated on 30-Nov-2023

Summary

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Gene symbol
CBG21034
Gene description
Protein CBG21034
Locus tag
CBG_21034
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Caenorhabditis briggsae (strain: AF16)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See CBG21034 in Genome Data Viewer
Location:
chromosome: II
Exon count:
6
Sequence:
Chromosome: II; NC_013486.2 (12415648..12424577, complement)

Chromosome II - NC_013486.2Genomic Context describing neighboring genes Neighboring gene Protein CBG21031 Neighboring gene Protein CBG21032 Neighboring gene Protein CBR-SSP-37 Neighboring gene Protein CBG21035 Neighboring gene Protein CBG21037

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013486.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. Stein LD, et al. PLoS Biol, 2003 Nov. PMID 14624247, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5' exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed DNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of gamma DNA polymerase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein CBG21034
XP_002631813.1
  • contains similarity to Pfam domain PF00476 DNA polymerase family A contains similarity to Interpro domains IPR019760 (DNA-directed DNA polymerase, family A, conserved site), IPR001098 (DNA-directed DNA polymerase, family A, palm domain), IPR002297 (DNA-directed DNA-polymerase, family A, mitochondria);
    Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013486.2 Reference assembly

    Range
    12415648..12424577 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002631767.1 → XP_002631813.1  Protein CBG21034 [Caenorhabditis briggsae]

    See identical proteins and their annotated locations for XP_002631813.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A8XZ80
    Conserved Domains (1) summary
    cl02626
    Location:386 → 827
    DNA_pol_A; Family A polymerase primarily fills DNA gaps that arise during DNA repair, recombination and replication
Nucleotide Protein
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