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CBG20661 Protein CBG20661 [ Caenorhabditis briggsae ]

Gene ID: 8573495, updated on 6-Jun-2024

Summary

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Gene symbol
CBG20661
Gene description
Protein CBG20661
Locus tag
CBG_20661
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Caenorhabditis briggsae (strain: AF16)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See CBG20661 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_013486.2 (11023810..11025285, complement)

Chromosome II - NC_013486.2Genomic Context describing neighboring genes Neighboring gene Protein CBG25663 Neighboring gene Protein CBG25664 Neighboring gene Protein CBR-MEN-1 Neighboring gene Protein CBR-JMJD-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013486.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. Stein LD, et al. PLoS Biol, 2003 Nov. PMID 14624247, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables diphosphomevalonate decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isopentenyl diphosphate biosynthetic process, mevalonate pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in isoprenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein CBG20661
XP_002631497.1
  • contains similarity to Pfam domain PF00288 GHMP kinases N terminal domain contains similarity to Interpro domains IPR005935 (Diphosphomevalonate decarboxylase), IPR006204 (GHMP kinase);
    Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013486.2 Reference assembly

    Range
    11023810..11025285 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002631451.1 → XP_002631497.1  Protein CBG20661 [Caenorhabditis briggsae]

    See identical proteins and their annotated locations for XP_002631497.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAE9DMH0, A0AAE9J7I1, A8XYB1
    Conserved Domains (1) summary
    PLN02407
    Location:11 → 334
    PLN02407; diphosphomevalonate decarboxylase
Nucleotide Protein
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