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    MSS18 Mss18p [ Saccharomyces cerevisiae S288c ]

    Gene ID: 856253, updated on 8-Jan-2012
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    Summary

    Gene symbol
    MSS18
    Gene description
    Mss18p
    Primary source
    SGD:S000006338
    Locus tag
    YPR134W
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Saccharomyces cerevisiae S288c (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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    Genomic context

    Sequence :
    Chromosome: XVI; NC_001148.4 (798051..798857)
    See MSS18 in MapViewer

    Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene Spn1p Neighboring gene Tom5p Neighboring gene Ctf4p Neighboring gene Rrp9p

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Defining potentially conserved RNA regulons of homologous zinc-finger RNA-binding proteins. Scherrer T, et al. Genome Biol, 2011. PMID 21232131.
    2. The genetic landscape of a cell. Costanzo M, et al. Science, 2010 Jan 22. PMID 20093466.
    3. Splicing of yeast aI5beta group I intron requires SUV3 to recycle MRS1 via mitochondrial degradosome-promoted decay of excised intron ribonucleoprotein (RNP). Turk EM, et al. J Biol Chem, 2010 Mar 19. PMID 20064926.
    4. A genetic interaction map of RNA-processing factors reveals links between Sem1/Dss1-containing complexes and mRNA export and splicing. Wilmes GM, et al. Mol Cell, 2008 Dec 5. PMID 19061648.
    5. A genomewide suppressor and enhancer analysis of cdc13-1 reveals varied cellular processes influencing telomere capping in Saccharomyces cerevisiae. Addinall SG, et al. Genetics, 2008 Dec. PMID 18845848.

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    1. defects in Suv3p result in accumulation of stable, excised group I intron ribonucleoproteins, which result in sequestration of Mrs1p, and a concomitant reduction in splicing of aI5beta
      Title: Splicing of yeast aI5beta group I intron requires SUV3 to recycle MRS1 via mitochondrial degradosome-promoted decay of excised intron ribonucleoprotein (RNP).
    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:36301 BioGRID:35054 AIM33    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:32814 ALG1    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:32944 ARO4    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:35524 ATP11    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:33581 ATP12    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:35059 ATP18    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:32965 BIT2    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:30980 CDC10    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:31825 CDC13    BioGRID  PubMed Synthetic Rescue 
    BioGRID:36301 BioGRID:31676 CDC73    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:32304 CHL4    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:34859 CSM2    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:35594 CWC25    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:34432 DFG16    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:35690 EAF7    BioGRID  PubMed Positive Genetic 
    BioGRID:36301 BioGRID:32768 ECM2    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:32564 EMI1    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:34857 FLX1    BioGRID  PubMed Positive Genetic 
    BioGRID:36301 BioGRID:33631 GCD14    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:31779 GEM1    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:36301 BioGRID:36728 GIM4    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:35584 GIS2    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:36301 BioGRID:36622 GPI16    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:33173 HNM1    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:35980 HRR25    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:32308 HSP78    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:32856 ICS2    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:34996 IST3    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:36056 KAP120    BioGRID  PubMed Positive Genetic 
    BioGRID:36301 BioGRID:35972 LEA1    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:35681 LSM7    BioGRID  PubMed Positive Genetic 
    BioGRID:36301 BioGRID:33993 LTV1    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:31862 LYS20    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:36811 MOT2    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:32028 MPS1    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:32082 MRH1    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:35847 MRPL50    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:35012 MRS1    BioGRID  PubMed Dosage Rescue 
    BioGRID:36301 BioGRID:32246 MSS116    BioGRID  PubMed Dosage Rescue 
    BioGRID:36301 BioGRID:35276 MUB1    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:34057 MUD2    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:31893 PAR32    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:32589 PAU10    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:33475 PET54    BioGRID  PubMed Dosage Rescue 
    BioGRID:36301 BioGRID:35280 PGM2    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:36650 PHO12    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:34557 PNS1    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:31217 PRP19    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36301 BioGRID:36032 PRP46    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36301 BioGRID:31438 PUS5    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:32477 RAD30    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:35137 RAD52    BioGRID  PubMed Positive Genetic 
    BioGRID:36301 BioGRID:32253 RAV2    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:33610 RPA34    BioGRID  PubMed Positive Genetic 
    BioGRID:36301 BioGRID:32047 RPT2    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:35441 SAP30    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:36388 SBP1    BioGRID  PubMed Positive Genetic 
    BioGRID:36301 BioGRID:36133 SGF11    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:31885 SHS1    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:34400 SIN3    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:35603 SIN4    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:35582 SIP3    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:35394 SKY1    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:31866 SOR2    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:34223 SRP40    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:30951 STE50    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:36987 SUS1    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:36149 SUV3    BioGRID  PubMed Dosage Rescue; Positive Genetic 
    BioGRID:36301 BioGRID:34398 TOP1    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:36835 TRP2    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:35401 UBP8    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:32865 UBS1    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:34971 VID28    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:31788 VPS8    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:32715 YBR013C    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:32358 YDR306C    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:36672 YEL057C    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:33876 YJR120W    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:31421 YLR152C    BioGRID  PubMed Negative Genetic 
    BioGRID:36301 BioGRID:36766 YPT31    BioGRID  PubMed Negative Genetic 
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    General gene information

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    Group I intron splicing IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Group I intron splicing IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		  
    mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    mitochondrion IC
    Inferred by Curator
    more info
    		 PubMed 
    mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Names
    Mss18p
    NP_015460.1
    • Nuclear encoded protein needed for efficient splicing of mitochondrial COX1 aI5beta intron; mss18 mutations block cleavage of 5' exon - intron junction; phenotype of intronless strain suggests additional functions
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001148.4

      Range
      798051..798857
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001184231.1 → NP_015460.1  Mss18p [Saccharomyces cerevisiae S288c]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P08593
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic BK006949.2 DAA11547.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    P08593.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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