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UREG_00580 ATP-dependent RNA helicase DDX18 [ Uncinocarpus reesii 1704 ]

Gene ID: 8439500, updated on 17-May-2024

Summary

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Gene symbol
UREG_00580
Gene description
ATP-dependent RNA helicase DDX18
Primary source
FungiDB:UREG_00580
Locus tag
UREG_00580
See related
VEuPathDB:UREG_00580
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Uncinocarpus reesii 1704 (strain: 1704)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Onygenaceae; Uncinocarpus
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Genomic context

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See UREG_00580 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_003052500.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003052500.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DDX18

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003052500.1 Reference assembly

    Range
    1168429..1170431
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002541020.1 → XP_002541066.1  ATP-dependent RNA helicase DDX18 [Uncinocarpus reesii 1704]

    See identical proteins and their annotated locations for XP_002541066.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4JDV3
    Conserved Domains (4) summary
    COG0513
    Location:118 → 567
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    cd00079
    Location:310 → 439
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    pfam13959
    Location:471 → 530
    DUF4217; Domain of unknown function (DUF4217)
    cl21455
    Location:125 → 297
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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Gene LinkOut

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