U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AT1G31450 Eukaryotic aspartyl protease family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840035, updated on 7-Sep-2023

Summary

Go to the top of the page Help
Gene symbol
AT1G31450
Gene description
Eukaryotic aspartyl protease family protein
Primary source
Araport:AT1G31450
Locus tag
AT1G31450
See related
TAIR:AT1G31450
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T8E3.12; T8E3_12
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See AT1G31450 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (11259851..11261234, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene SH3 domain-containing protein Neighboring gene vitellogenin-2 protein Neighboring gene Major facilitator superfamily protein Neighboring gene shoot gravitropism 2 (SGR2) Neighboring gene HXXXD-type acyl-transferase family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Fertilized egg cells secrete endopeptidases to avoid polytubey. Yu X, et al. Nature, 2021 Apr. PMID 33790463
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

NM_102884.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables endopeptidase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within pollen tube guidance IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
is_active_in extracellular region IDA
Inferred from Direct Assay
more info
 PubMed 
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Eukaryotic aspartyl protease family protein
NP_174430.1
  • Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, egg cell; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G35615.1); Has 3223 Blast hits to 3206 proteins in 307 species: Archae - 0; Bacteria - 2; Metazoa - 621; Fungi - 516; Plants - 1915; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    11259851..11261234 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102884.2 → NP_174430.1  Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174430.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2DUH0, Q9C864
    Conserved Domains (3) summary
    cd05476
    Location:84 → 441
    pepsin_A_like_plant; Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants
    PLN03146
    Location:8 → 444
    PLN03146; aspartyl protease family protein; Provisional
    cl11403
    Location:89 → 141
    pepsin_retropepsin_like; Cellular and retroviral pepsin-like aspartate proteases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools