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AT1G08940 Phosphoglycerate mutase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837415, updated on 15-Feb-2024

Summary

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Gene symbol
AT1G08940
Gene description
Phosphoglycerate mutase family protein
Primary source
Araport:AT1G08940
Locus tag
AT1G08940
See related
TAIR:AT1G08940
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F7G19.18; F7G19_18
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Genomic context

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See AT1G08940 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (2877430..2879169)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ERD (early response to dehydration) six-like 1 Neighboring gene Major facilitator superfamily protein Neighboring gene tRNA-Pro Neighboring gene cation exchanger 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_100766.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Phosphoglycerate mutase family protein
NP_172369.1
  • Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G05170.1); Has 1152 Blast hits to 1140 proteins in 473 species: Archae - 9; Bacteria - 736; Metazoa - 2; Fungi - 189; Plants - 85; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    2877430..2879169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100766.3 → NP_172369.1  Phosphoglycerate mutase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172369.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04035
    UniProtKB/TrEMBL
    A0A178W112, A0A5S9TD48
    Conserved Domains (1) summary
    pfam00300
    Location:12 → 221
    His_Phos_1; Histidine phosphatase superfamily (branch 1)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O04035.2

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