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ORP4C OSBP(oxysterol binding protein)-related protein 4C [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835830, updated on 15-Oct-2023

Summary

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Gene symbol
ORP4C
Gene description
OSBP(oxysterol binding protein)-related protein 4C
Primary source
Araport:AT5G57240
Locus tag
AT5G57240
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MJB24.5; MJB24_5; OSBP(oxysterol binding protein)-related protein 4C
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Genomic context

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Location:
chromosome: 5
Exon count:
6
Sequence:
Chromosome: 5; NC_003076.8 (23192872..23195476)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 81, subfamily F, polypeptide 2 Neighboring gene Thioredoxin superfamily protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene cytochrome P450, family 71, subfamily B, polypeptide 10 Neighboring gene Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001037011.2
NM_001345250.1
NM_001345251.1
NM_001345252.1
NM_125106.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
OSBP(oxysterol binding protein)-related protein 4C
NP_001032088.1
  • OSBP(oxysterol binding protein)-related protein 4C (ORP4C); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein, conserved site (InterPro:IPR018494), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.1); Has 2168 Blast hits to 2165 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1089; Fungi - 634; Plants - 225; Viruses - 0; Other Eukaryotes - 220 (source: NCBI BLink).
NP_200534.1
  • OSBP(oxysterol binding protein)-related protein 4C (ORP4C); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein, conserved site (InterPro:IPR018494), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.1); Has 2168 Blast hits to 2165 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1089; Fungi - 634; Plants - 225; Viruses - 0; Other Eukaryotes - 220 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    23192872..23195476
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125106.3 → NP_200534.1  OSBP(oxysterol binding protein)-related protein 4C [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200534.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LVD4
    UniProtKB/TrEMBL
    A0A654GBR5
    Conserved Domains (1) summary
    pfam01237
    Location:30 → 352
    Oxysterol_BP; Oxysterol-binding protein

  2. NM_001345250.1 → NP_001329986.1  OSBP(oxysterol binding protein)-related protein 4C [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UJK2, A0A1P8B9E6, A0A384LHK8, A0A654GBR5

  3. NM_001345251.1 → NP_001329984.1  OSBP(oxysterol binding protein)-related protein 4C [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UJK2, A0A1P8B9E6, A0A384LHK8, A0A654GBR5

  4. NM_001345252.1 → NP_001329985.1  OSBP(oxysterol binding protein)-related protein 4C [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LVD4
    UniProtKB/TrEMBL
    A0A654GBR5
    Conserved Domains (1) summary
    pfam01237
    Location:30 → 352
    Oxysterol_BP; Oxysterol-binding protein

  5. NM_001037011.2 → NP_001032088.1  OSBP(oxysterol binding protein)-related protein 4C [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001032088.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LVD4
    UniProtKB/TrEMBL
    A0A654GBR5
    Conserved Domains (1) summary
    pfam01237
    Location:30 → 352
    Oxysterol_BP; Oxysterol-binding protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LVD4.1

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