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Smp_131150 polymyositis/scleroderma autoantigen-related [ Schistosoma mansoni ]

Gene ID: 8349845, updated on 11-Apr-2024

Summary

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Gene symbol
Smp_131150
Gene description
polymyositis/scleroderma autoantigen-related
Locus tag
Smp_131150
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schistosoma mansoni (strain: Puerto Rico)
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma
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Genomic context

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Location:
chromosome: 4
Exon count:
19
Sequence:
Chromosome: 4; NC_031498.1 (28321080..28359361)

Chromosome 4 - NC_031498.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene uncharacterized protein Neighboring gene hypothetical protein Neighboring gene putative gtp-binding protein hflx Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_031498.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5'-RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in TRAMP-dependent tRNA surveillance pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in histone mRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear polyadenylation-dependent CUT catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear polyadenylation-dependent antisense transcript catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear polyadenylation-dependent rRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear polyadenylation-dependent snRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear polyadenylation-dependent snoRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in poly(A)-dependent snoRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polymyositis/scleroderma autoantigen-related

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_031498.1 Reference assembly

    Range
    28321080..28359361
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018797400.1 → XP_018652445.1  polymyositis/scleroderma autoantigen-related [Schistosoma mansoni]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3Q0KLU2
Protein Accession Links
GenPept Link UniProtKB Link
CCD79841.1

Gene LinkOut

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Molecular Biology Databases