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GUS3 glucuronidase 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 833437, updated on 15-Feb-2024

Summary

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Gene symbol
GUS3
Gene description
glucuronidase 3
Primary source
Araport:AT5G34940
Locus tag
AT5G34940
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtGUS3; glucuronidase 3; T2L5.6
Summary
The protein is predicted (WoLF PSORT program) to be membrane-associated.
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Genomic context

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Location:
chromosome: 5
Exon count:
9
Sequence:
Chromosome: 5; NC_003076.8 (13235741..13238884, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene arogenate dehydrogenase Neighboring gene miscRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Increase of homologous recombination frequency in vascular tissue of Arabidopsis plants exposed to salt stress. Boyko A, et al. Plant Cell Physiol, 2006 Jun. PMID 16608867
  2. Characterization of Arabidopsis AtUGT85A and AtGUS gene families and their expression in rapidly dividing tissues. Woo HH, et al. Genomics, 2007 Jul. PMID 17498920, Free PMC Article
  3. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714
  5. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001344092.1
NM_122885.2
NM_180761.1
NM_180762.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables beta-glucuronidase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables hydrolase activity, acting on glycosyl bonds IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
glucuronidase 3
NP_198344.2
  • glucuronidase 3 (GUS3); FUNCTIONS IN: beta-glucuronidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 340 Blast hits to 334 proteins in 62 species: Archae - 0; Bacteria - 20; Metazoa - 169; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
NP_851092.1
  • glucuronidase 3 (GUS3); FUNCTIONS IN: beta-glucuronidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 1 (TAIR:AT5G61250.1); Has 353 Blast hits to 349 proteins in 64 species: Archae - 0; Bacteria - 24; Metazoa - 175; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
NP_851093.1
  • glucuronidase 3 (GUS3); FUNCTIONS IN: beta-glucuronidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 360 Blast hits to 353 proteins in 64 species: Archae - 0; Bacteria - 24; Metazoa - 178; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    13235741..13238884 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_180762.3 → NP_851093.1  glucuronidase 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_851093.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O82604, O82605, Q0WP10, Q9FZP1
    UniProtKB/TrEMBL
    A0A178ULV3
    Conserved Domains (1) summary
    pfam03662
    Location:31 → 346
    Glyco_hydro_79n; Glycosyl hydrolase family 79, N-terminal domain

  2. NM_001344092.1 → NP_001330486.1  glucuronidase 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BAZ2

  3. NM_122885.2 → NP_198344.2  glucuronidase 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198344.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4JWV6
    Conserved Domains (1) summary
    pfam03662
    Location:31 → 346
    Glyco_hydro_79n; Glycosyl hydrolase family 79, N-terminal domain

  4. NM_180761.1 → NP_851092.1  glucuronidase 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_851092.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2FDM1, F4JWV5
    Conserved Domains (1) summary
    pfam03662
    Location:1 → 211
    Glyco_hydro_79n; Glycosyl hydrolase family 79, N-terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FZP1.2

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