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mRNA capping enzyme family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831240, updated on 18-Sep-2024

Summary

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Official Full Name
mRNA capping enzyme family protein
Primary source
TAIR:AT5G01290
Locus tag
AT5G01290
See related
Araport:AT5G01290
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T10O8.2
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Genomic context

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Location:
chromosome: 5
Exon count:
15
Sequence:
Chromosome: 5; NC_003076.8 (117297..121569)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene carboxyl-terminal domain (ctd) phosphatase-like 2 Neighboring gene GPI-anchored protein Neighboring gene PEBP (phosphatidylethanolamine-binding protein) family protein Neighboring gene transcription factor bHLH140-like protein Neighboring gene APRATAXIN-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_120207.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables mRNA 5'-triphosphate monophosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables mRNA guanylyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
mRNA capping enzyme family protein
NP_195749.2
  • mRNA capping enzyme family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity, mRNA guanylyltransferase activity, polynucleotide 5'-phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, mRNA processing, mRNA capping, dephosphorylation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT3G09100.2); Has 888 Blast hits to 860 proteins in 246 species: Archae - 0; Bacteria - 2; Metazoa - 276; Fungi - 241; Plants - 79; Viruses - 71; Other Eukaryotes - 219 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    117297..121569
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120207.3 → NP_195749.2  mRNA capping enzyme family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195749.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UIV5, A0A5S9Y0D2, Q8GSD7
    Conserved Domains (3) summary
    cd07895
    Location:314 → 532
    Adenylation_mRNA_capping; Adenylation domain of GTP-dependent mRNA capping enzymes
    pfam03919
    Location:536 → 630
    mRNA_cap_C; mRNA capping enzyme, C-terminal domain
    cl21483
    Location:123 → 227
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
Nucleotide Protein
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