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TGA10 bZIP transcription factor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830575, updated on 18-Sep-2024

Summary

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Official Symbol
TGA10
Official Full Name
bZIP transcription factor family protein
Primary source
TAIR:AT5G06839
Locus tag
AT5G06839
See related
Araport:AT5G06839
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
bZIP65; TGACG (TGA) motif-binding protein 10
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Genomic context

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Location:
chromosome: 5
Exon count:
11
Sequence:
Chromosome: 5; NC_003076.8 (2120472..2126457)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene transcription termination factor family protein Neighboring gene STRUBBELIG-receptor family 2 Neighboring gene uncharacterized protein Neighboring gene C2 calcium/lipid-binding plant phosphoribosyltransferase family protein Neighboring gene ncRNA Neighboring gene polygalacturonase inhibiting protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Noshi M, et al. Plant Sci, 2016 Nov. PMID 27717447
  2. Arabidopsis basic leucine-zipper transcription factors TGA9 and TGA10 interact with floral glutaredoxins ROXY1 and ROXY2 and are redundantly required for anther development. Murmu J, et al. Plant Physiol, 2010 Nov. PMID 20805327, Free PMC Article
  3. Cross-species annotation of basic leucine zipper factor interactions: Insight into the evolution of closed interaction networks. Deppmann CD, et al. Mol Biol Evol, 2006 Aug. PMID 16731568
  4. Large-scale identification of gibberellin-related transcription factors defines group VII ETHYLENE RESPONSE FACTORS as functional DELLA partners. Marín-de la Rosa N, et al. Plant Physiol, 2014 Oct. PMID 25118255, Free PMC Article
  5. bZIP transcription factors in Arabidopsis. Jakoby M, et al. Trends Plant Sci, 2002 Mar. PMID 11906833

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. TGA10 is involved in reactive oxygen species mediated signaling during pathogen-associated molecular pattern responses.
    Title: Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
  2. Mutations in TGA9 and TGA10 lead to male sterility and differential defects in abaxial and adaxial anther lobe development similar to roxy1 roxy2 mutants. [TGA10]
    Title: Arabidopsis basic leucine-zipper transcription factors TGA9 and TGA10 interact with floral glutaredoxins ROXY1 and ROXY2 and are redundantly required for anther development.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001085069.1
NM_001203315.2
NM_180453.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein homodimerization activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
involved_in anther development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in hydrogen peroxide mediated signaling pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of DNA-templated transcription ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
involved_in response to molecule of bacterial origin IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to molecule of bacterial origin IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
bZIP transcription factor family protein
NP_001078538.1
  • bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: leaf whorl, root, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Bcr-Abl oncoprotein oligomerisation (InterPro:IPR015123), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT1G08320.3); Has 907 Blast hits to 906 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 5; Plants - 800; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).
NP_001190244.1
  • bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: leaf whorl, root, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT1G08320.3).
NP_850784.1
  • bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: leaf whorl, root, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT1G08320.3); Has 904 Blast hits to 903 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 2; Plants - 802; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    2120472..2126457
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001203315.2 → NP_001190244.1  bZIP transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190244.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    E3VNM4, F4K593, Q93XM5, Q9FL60
    UniProtKB/TrEMBL
    A0A5S9Y2L2
    Conserved Domains (2) summary
    cd14708
    Location:161 → 213
    bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
    pfam14144
    Location:253 → 328
    DOG1; Seed dormancy control

  2. NM_180453.2 → NP_850784.1  bZIP transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850784.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y2L2, A0A654FZ47
    Conserved Domains (2) summary
    cd14708
    Location:118 → 170
    bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
    pfam14144
    Location:210 → 286
    DOG1; Seed dormancy control

  3. NM_001085069.1 → NP_001078538.1  bZIP transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078538.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y2L2, A8MR34
    Conserved Domains (2) summary
    cd14708
    Location:118 → 170
    bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
    pfam14144
    Location:211 → 287
    DOG1; Seed dormancy control
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
E3VNM4.1

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