U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CTRG_00883 histone deacetylase HDA1 [ Candida tropicalis MYA-3404 ]

Gene ID: 8297653, updated on 17-May-2024

Summary

Go to the top of the page Help
Gene symbol
CTRG_00883
Gene description
histone deacetylase HDA1
Locus tag
CTRG_00883
See related
FungiDB:CTRG_00883; VEuPathDB:CTRG_00883
Gene type
protein coding
RNA name
histone deacetylase HDA1
RefSeq status
PROVISIONAL
Organism
Candida tropicalis MYA-3404 (strain: MYA-3404)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Unknown
Exon count:
1

NW_003020038.1Genomic Context describing neighboring genes Neighboring gene 5-aminolevulinate synthase, mitochondrial precursor Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003020038.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evolution of pathogenicity and sexual reproduction in eight Candida genomes. Butler G, et al. Nature, 2009 Jun 4. PMID 19465905, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
histone deacetylase HDA1
XP_002546102.1
  • Candida DB at Institut Pasteur CTRG_00883

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003020038.1 Reference assembly

    Range
    1983789..1986338
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002546056.1 → XP_002546102.1  histone deacetylase HDA1 [Candida tropicalis MYA-3404]

    See identical proteins and their annotated locations for XP_002546102.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C5M494
    Conserved Domains (2) summary
    pfam09757
    Location:543 → 839
    Arb2; Arb2 domain
    cl17011
    Location:165 → 484
    Arginase_HDAC; Arginase-like and histone-like hydrolases
Protein Accession Links
GenPept Link UniProtKB Link
EER36144.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials