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KLTH0G13024g KLTH0G13024p [ Lachancea thermotolerans CBS 6340 ]

Gene ID: 8293880, updated on 21-Dec-2023

Summary

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Gene symbol
KLTH0G13024g
Gene description
KLTH0G13024p
Locus tag
KLTH0G13024g
Gene type
protein coding
RNA name
KLTH0G13024p
RefSeq status
PROVISIONAL
Organism
Lachancea thermotolerans CBS 6340 (strain: CBS 6340)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Lachancea
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Genomic context

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Location:
chromosome: G
Exon count:
2
Sequence:
Chromosome: G; NC_013083.1 (1115231..1117240)

Chromosome G - NC_013083.1Genomic Context describing neighboring genes Neighboring gene KLTH0G12980p Neighboring gene KLTH0G13002p Neighboring gene KLTH0G13046p Neighboring gene KLTH0G13068p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013083.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of protoploid Saccharomycetaceae. Génolevures Consortium, et al. Genome Res, 2009 Oct. PMID 19525356, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in actin filament network formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin filament bundle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
KLTH0G13024p
XP_002555597.1
  • highly similar to uniprot|P32599 Saccharomyces cerevisiae YDR129C SAC6 Fimbrin actin-bundling protein cooperates with Scp1p (calponin/transgelin) in the organization and maintenance of the actin cytoskeleton

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013083.1 Reference assembly

    Range
    1115231..1117240
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002555551.1 → XP_002555597.1  KLTH0G13024p [Lachancea thermotolerans CBS 6340]

    See identical proteins and their annotated locations for XP_002555597.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C5DMZ9
    Conserved Domains (4) summary
    smart00033
    Location:416 → 520
    CH; Calponin homology domain
    COG5069
    Location:1 → 641
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    cd00014
    Location:141 → 260
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cl08302
    Location:23 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
Nucleotide Protein
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