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KLTH0C02112g 40S ribosomal protein S0 [ Lachancea thermotolerans CBS 6340 ]

Gene ID: 8291179, updated on 21-Dec-2023

Summary

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Gene symbol
KLTH0C02112g
Gene description
40S ribosomal protein S0
Locus tag
KLTH0C02112g
Gene type
protein coding
RNA name
40S ribosomal protein S0
RefSeq status
PROVISIONAL
Organism
Lachancea thermotolerans CBS 6340 (strain: CBS 6340)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Lachancea
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Genomic context

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See KLTH0C02112g in Genome Data Viewer
Location:
chromosome: C
Exon count:
2
Sequence:
Chromosome: C; NC_013079.1 (189741..190838, complement)

Chromosome C - NC_013079.1Genomic Context describing neighboring genes Neighboring gene KLTH0C02068p Neighboring gene mitochondrial 37S ribosomal protein RSM27 Neighboring gene KLTH0C02134p Neighboring gene KLTH0C02156p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013079.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of protoploid Saccharomycetaceae. Génolevures Consortium, et al. Genome Res, 2009 Oct. PMID 19525356, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
40S ribosomal protein S0
XP_002552320.1
  • highly similar to uniprot|P32905 Saccharomyces cerevisiae YGR214W RPS0A protein component of the small (40S) ribosomal subunit

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013079.1 Reference assembly

    Range
    189741..190838 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002552274.1 → XP_002552320.1  40S ribosomal protein S0 [Lachancea thermotolerans CBS 6340]

    See identical proteins and their annotated locations for XP_002552320.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    C5DDM1
    Conserved Domains (3) summary
    PTZ00254
    Location:1 → 247
    PTZ00254; 40S ribosomal protein SA; Provisional
    pfam16122
    Location:202 → 251
    40S_SA_C; 40S ribosomal protein SA C-terminus
    cl00315
    Location:12 → 206
    RPS2; Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
C5DDM1.1

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