PP2-A2 lectin-like protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Gene symbol: PP2-A2
Gene description: lectin-like protein
Primary source: Araport:AT4G19850
Locus tag: AT4G19850
See related: TAIR:AT4G19850
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ARABIDOPSIS THALIANA PHLOEM PROTEIN 2-A2; ATPP2-A2; phloem protein 2-A2; PP2A2; T16H5.210; T16H5_210
Summary: encodes a protein similar to phloem protein 2 in cucumber. a member of a large gene family.
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Genomic context

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See PP2-A2 in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 3

Sequence:: Chromosome: 4; NC_003075.7 (10776591..10777588)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_001160782.3

Supported by ESTs:

NM_001341375.1

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables carbohydrate binding	ISS Inferred from Sequence or Structural Similarity more info	PubMed

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: lectin-like protein

NP_001154254.2

lectin-related; FUNCTIONS IN: carbohydrate binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: phloem; BEST Arabidopsis thaliana protein match is: phloem protein 2-A1 (TAIR:AT4G19840.1); Has 510 Blast hits to 505 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 510; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NP_001320001.1

phloem protein 2-A2 (PP2-A2); BEST Arabidopsis thaliana protein match is: phloem protein 2-A4 (TAIR:AT1G33920.1); Has 437 Blast hits to 437 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 437; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

10776591..10777588

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001341376.1 → NP_001328114.1 lectin-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B3N9, A0A5S9XUN8, A0A654FR19

Conserved Domains (1) summary

pfam14299
Location:62 → 217

PP2; Phloem protein 2
NM_001341375.1 → NP_001320001.1 lectin-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A2H1ZEP0
NM_001160782.3 → NP_001154254.2 lectin-like protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001154254.2

Status: REVIEWED

UniProtKB/TrEMBL

A0A5S9XUN8, F4JTZ6

Conserved Domains (1) summary

pfam14299
Location:62 → 195

PP2; Phloem protein 2