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SDP1 myb family transcription factor [ Micromonas commoda ]

Gene ID: 8250427, updated on 19-Jul-2017

Summary

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Gene symbol
SDP1
Gene description
myb family transcription factor
Locus tag
MICPUN_113469
Gene type
protein coding
RNA name
myb family transcription factor
RefSeq status
PROVISIONAL
Organism
Micromonas commoda (strain: RCC299)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
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Genomic context

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See SDP1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_013038.1 (466271..468436)

Chromosome 1 - NC_013038.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene uncharacterized protein Neighboring gene aminotransferase Neighboring gene glycosyltransferase family 20 protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013038.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Worden AZ, et al. Science, 2009 Apr 10. PMID 19359590

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
myb family transcription factor
XP_002507108.1
  • SANT domain DNA-binding protein 1; expressed

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013038.1 Reference assembly

    Range
    466271..468436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002507062.1 → XP_002507108.1  myb family transcription factor [Micromonas commoda]

    See identical proteins and their annotated locations for XP_002507108.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C1FDC4
    Conserved Domains (3) summary
    smart00717
    Location:421 → 471
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cd11660
    Location:422 → 471
    SANT_TRF; Telomere repeat binding factor-like DNA-binding domains of the SANT/myb-like family
    pfam11149
    Location:229 → 258
    DUF2924; Protein of unknown function (DUF2924)
Nucleotide Protein
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