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Phum_PHUM474660 uncharacterized protein [ Pediculus humanus corporis (human body louse) ]

Gene ID: 8239143, updated on 6-Jan-2024

Summary

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Gene symbol
Phum_PHUM474660
Gene description
uncharacterized protein
Locus tag
Phum_PHUM474660
See related
VectorBase:PHUM474660
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pediculus humanus corporis (strain: USDA, sub-species: corporis)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Psocodea; Phthiraptera; Anoplura; Pediculidae; Pediculus
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Genomic context

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See Phum_PHUM474660 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
12

NW_002987822.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Frequenin-1, putative Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002987822.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA (cytidine-5-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_002430351.1
  • encoded by transcript Phum_PHUM474660-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002987822.1 Reference assembly

    Range
    402494..405480
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002430306.1 → XP_002430351.1  uncharacterized protein Phum_PHUM474660 [Pediculus humanus corporis]

    See identical proteins and their annotated locations for XP_002430351.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E0VW57
    Conserved Domains (2) summary
    COG0144
    Location:18 → 415
    RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]
    cl17173
    Location:154 → 411
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials