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Phum_PHUM200260 Arginyl-tRNA synthetase, putative [ Pediculus humanus corporis (human body louse) ]

Gene ID: 8238475, updated on 6-Jan-2024

Summary

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Gene symbol
Phum_PHUM200260
Gene description
Arginyl-tRNA synthetase, putative
Locus tag
Phum_PHUM200260
See related
VectorBase:PHUM200260
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pediculus humanus corporis (strain: USDA, sub-species: corporis)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Psocodea; Phthiraptera; Anoplura; Pediculidae; Pediculus
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Genomic context

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See Phum_PHUM200260 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
9

NW_002987162.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002987162.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables arginine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arginyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Arginyl-tRNA synthetase, putative
XP_002425430.1
  • encoded by transcript Phum_PHUM200260-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002987162.1 Reference assembly

    Range
    441630..444013 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002425385.1 → XP_002425430.1  Arginyl-tRNA synthetase, putative [Pediculus humanus corporis]

    See identical proteins and their annotated locations for XP_002425430.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E0VH36
    Conserved Domains (4) summary
    cd00671
    Location:177 → 441
    ArgRS_core; catalytic core domain of arginyl-tRNA synthetases
    smart01016
    Location:62 → 150
    Arg_tRNA_synt_N; Arginyl tRNA synthetase N terminal dom
    pfam00750
    Location:159 → 504
    tRNA-synt_1d; tRNA synthetases class I (R)
    cl12020
    Location:480 → 558
    Anticodon_Ia_like; Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains
Nucleotide Protein
Heading Accession and Version

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