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Phum_PHUM097980 Endoplasmic reticulum-golgi intermediate compartment protein, putative [ Pediculus humanus corporis (human body louse) ]

Gene ID: 8238068, updated on 6-Jan-2024

Summary

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Gene symbol
Phum_PHUM097980
Gene description
Endoplasmic reticulum-golgi intermediate compartment protein, putative
Locus tag
Phum_PHUM097980
See related
VectorBase:PHUM097980
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pediculus humanus corporis (strain: USDA, sub-species: corporis)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Psocodea; Phthiraptera; Anoplura; Pediculidae; Pediculus
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Genomic context

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See Phum_PHUM097980 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_002987070.1Genomic Context describing neighboring genes Neighboring gene GSTD1-5 protein, putative Neighboring gene protein FAM112B, putative Neighboring gene carboxypeptidase M precursor, putative Neighboring gene zinc finger protein DHHC domain containing protein, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002987070.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Endoplasmic reticulum-golgi intermediate compartment protein, putative
XP_002423949.1
  • encoded by transcript Phum_PHUM097980-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002987070.1 Reference assembly

    Range
    69932..71465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002423904.1 → XP_002423949.1  Endoplasmic reticulum-golgi intermediate compartment protein, putative [Pediculus humanus corporis]

    See identical proteins and their annotated locations for XP_002423949.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E0VCV5
    Conserved Domains (2) summary
    pfam07970
    Location:174 → 336
    COPIIcoated_ERV; Endoplasmic reticulum vesicle transporter
    pfam13850
    Location:16 → 100
    ERGIC_N; Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases