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Phum_PHUM002150 DNA-directed RNA polymerase I 135 kDa polypeptide, putative [ Pediculus humanus corporis (human body louse) ]

Gene ID: 8233318, updated on 6-Jan-2024

Summary

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Gene symbol
Phum_PHUM002150
Gene description
DNA-directed RNA polymerase I 135 kDa polypeptide, putative
Locus tag
Phum_PHUM002150
See related
VectorBase:PHUM002150
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pediculus humanus corporis (strain: USDA, sub-species: corporis)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Psocodea; Phthiraptera; Anoplura; Pediculidae; Pediculus
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Genomic context

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See Phum_PHUM002150 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
19

NW_002986991.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene squamous cell carcinoma antigen, putative Neighboring gene 3-5 exonuclease, putative Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002986991.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribonucleoside binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase I 135 kDa polypeptide, putative
XP_002422580.1
  • encoded by transcript Phum_PHUM002150-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002986991.1 Reference assembly

    Range
    492215..499699
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002422535.1 → XP_002422580.1  DNA-directed RNA polymerase I 135 kDa polypeptide, putative [Pediculus humanus corporis]

    See identical proteins and their annotated locations for XP_002422580.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E0V8Y6
    Conserved Domains (4) summary
    COG0085
    Location:24 → 1113
    RpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit [Transcription]
    cd00653
    Location:40 → 1113
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04561
    Location:189 → 379
    RNA_pol_Rpb2_2; RNA polymerase Rpb2, domain 2
    pfam06883
    Location:567 → 619
    RNA_pol_Rpa2_4; RNA polymerase I, Rpa2 specific domain
Nucleotide Protein
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