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Phum_PHUM513200 ornithine aminotransferase, putative [ Pediculus humanus corporis (human body louse) ]

Gene ID: 8233119, updated on 6-Jan-2024

Summary

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Gene symbol
Phum_PHUM513200
Gene description
ornithine aminotransferase, putative
Locus tag
Phum_PHUM513200
See related
VectorBase:PHUM513200
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pediculus humanus corporis (strain: USDA, sub-species: corporis)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Psocodea; Phthiraptera; Anoplura; Pediculidae; Pediculus
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Genomic context

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See Phum_PHUM513200 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_002987850.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ornithine aminotransferase, putative Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002987850.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ornithine aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arginine catabolic process to glutamate IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in arginine catabolic process to proline via ornithine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ornithine aminotransferase, putative
XP_002431135.1
  • encoded by transcript Phum_PHUM513200-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002987850.1 Reference assembly

    Range
    857604..859854
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002431090.1 → XP_002431135.1  ornithine aminotransferase, putative [Pediculus humanus corporis]

    See identical proteins and their annotated locations for XP_002431135.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E0VYE1
    Conserved Domains (2) summary
    TIGR00707
    Location:40 → 418
    argD; transaminase, acetylornithine/succinylornithine family
    cl18945
    Location:29 → 422
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials