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Dfer_3085 DNA polymerase LigD, polymerase domain-containing protein [ Dyadobacter fermentans DSM 18053 ]

Gene ID: 8226659, discontinued on 6-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
Dfer_3085
Gene description
DNA polymerase LigD, polymerase domain-containing protein
Locus tag
Dfer_3085
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Dyadobacter fermentans DSM 18053 (strain: DSM 18053, nat-host: Zea mays, other: type strain of Dyadobacter fermentans)
Lineage
Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Non-homologous end-joining, organism-specific biosystem (from KEGG)
    Non-homologous end-joining, organism-specific biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
  • Non-homologous end-joining, conserved biosystem (from KEGG)
    Non-homologous end-joining, conserved biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
Names
DNA polymerase LigD, polymerase domain-containing protein
YP_003087465.1
  • TIGRFAM: DNA polymerase LigD, polymerase domain protein
    PFAM: DNA primase small subunit
    KEGG: chu:CHU_2837 ATP-dependent DNA ligase

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013037.1 Reference assembly

    Range
    3773083..3773982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003087465.1 DNA polymerase LigD, polymerase domain-containing protein [Dyadobacter fermentans DSM 18053]

    Status: PROVISIONAL