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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820636, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT3G14190
Locus tag
AT3G14190
See related
Araport:AT3G14190
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
CMR1; COPPER MODIFIED RESISTANCE 1; PANS1; PATRONUS 1
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Sequence:
Chromosome: 3; NC_003074.8 (4710483..4712569)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene sequence-specific DNA binding transcription factor Neighboring gene ncRNA Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene Phosphoinositide phosphatase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis COPPER MODIFIED RESISTANCE1/PATRONUS1 is essential for growth adaptation to stress and required for mitotic onset control. Juraniec M, et al. New Phytol, 2016 Jan. PMID 26261921
  2. PATRONUS1 is expressed in meiotic prophase I to regulate centromeric cohesion in Arabidopsis and shows synthetic lethality with OSD1. Singh DK, et al. BMC Plant Biol, 2015 Aug 14. PMID 26272661, Free PMC Article
  3. SHUGOSHINs and PATRONUS protect meiotic centromere cohesion in Arabidopsis thaliana. Zamariola L, et al. Plant J, 2014 Mar. PMID 24506176
  4. Centromeric cohesion is protected twice at meiosis, by SHUGOSHINs at anaphase I and by PATRONUS at interkinesis. Cromer L, et al. Curr Biol, 2013 Nov 4. PMID 24206843
  5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Likely, CMR1/PANS1 coordinates mitotic cell cycle progression by acting as an anaphase-promoting complex/cyclosome (APC/C) inhibitor and plays a key role in growth adaptation to stress.
    Title: Arabidopsis COPPER MODIFIED RESISTANCE1/PATRONUS1 is essential for growth adaptation to stress and required for mitotic onset control.
  2. PANS1 is expressed mainly in meiosis I where it has an important function; PANS1 and OSD1 are part of a network linking centromere cohesion and cell cycle progression through control of Anaphase Promoting Complex/Cyclosome (APC/C) activity.
    Title: PATRONUS1 is expressed in meiotic prophase I to regulate centromeric cohesion in Arabidopsis and shows synthetic lethality with OSD1.
  3. preserves ploidy stability during meiosis and mitosis
    Title: SHUGOSHINs and PATRONUS protect meiotic centromere cohesion in Arabidopsis thaliana.
  4. Study shows that both Arabidopsis SHUGOSHINs paralogs, At3g10440 and At5g04320, are required for complete protection of centromeric cohesins during meiosis I, without apparent somatic function, and (2) identified PATRONUS (PANS1, At3g14190), a novel protein required for protection of meiotic centromeric cohesion.
    Title: Centromeric cohesion is protected twice at meiosis, by SHUGOSHINs at anaphase I and by PATRONUS at interkinesis.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001338112.1
NM_112275.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within positive regulation of maintenance of meiotic sister chromatid cohesion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within regulation of mitotic cell cycle IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_566480.1
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12360.1); Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4710483..4712569
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112275.3 → NP_566480.1  uncharacterized protein AT3G14190 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566480.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q84WK8, Q8LFX6, Q9LJG6
    UniProtKB/TrEMBL
    A0A178V7L5, A0A5S9XC79, A0A654F717

  2. NM_001338112.1 → NP_001327476.1  uncharacterized protein AT3G14190 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q84WK8, Q8LFX6, Q9LJG6
    UniProtKB/TrEMBL
    A0A178V7L5, A0A5S9XC79, A0A654F717
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LJG6.1

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