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PAS_chr4_0648 Spermine synthase, required for the biosynthesis of spermine [ Komagataella phaffii GS115 ]

Gene ID: 8201355, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr4_0648
Gene description
Spermine synthase, required for the biosynthesis of spermine
Locus tag
PAS_chr4_0648
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr4_0648 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_012966.1 (1258776..1259669, complement)

Chromosome 4 - NC_012966.1Genomic Context describing neighboring genes Neighboring gene Acetylornithine aminotransferase Neighboring gene Low affinity vacuolar membrane localized monovalent cation/H+ antiporter Neighboring gene UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p Neighboring gene Hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012966.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables spermidine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in spermidine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Spermine synthase, required for the biosynthesis of spermine

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012966.1 Reference assembly

    Range
    1258776..1259669 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002494040.1 → XP_002494085.1  Spermine synthase, required for the biosynthesis of spermine [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002494085.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R8I1, F2QYL4
    Conserved Domains (1) summary
    cl17173
    Location:16 → 290
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
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