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PAS_chr2-2_0061 Essential abundant protein involved in regulation of transcription [ Komagataella phaffii GS115 ]

Gene ID: 8199166, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr2-2_0061
Gene description
Essential abundant protein involved in regulation of transcription
Locus tag
PAS_chr2-2_0061
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr2-2_0061 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_012964.1 (2264024..2269837, complement)

Chromosome 2 - NC_012964.1Genomic Context describing neighboring genes Neighboring gene NADPH-dependent 1-acyl dihydroxyacetone phosphate reductase Neighboring gene uncharacterized protein Neighboring gene 6-phosphofructo-2-kinase, inhibited by phosphoenolpyruvate and sn-glycerol 3-phosphate, has negligib Neighboring gene Nucleoside diphosphate kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012964.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables TBP-class protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Essential abundant protein involved in regulation of transcription

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012964.1 Reference assembly

    Range
    2264024..2269837 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002492107.1 → XP_002492152.1  Essential abundant protein involved in regulation of transcription [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002492152.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R2Z8, F2QQT3
    Conserved Domains (2) summary
    COG0553
    Location:1228 → 1856
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    pfam12054
    Location:655 → 1121
    DUF3535; Domain of unknown function (DUF3535)
Nucleotide Protein
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