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PAS_chr2-2_0363 Protein required for the assembly of box H/ACA snoRNPs and for pre-rRNA processing [ Komagataella phaffii GS115 ]

Gene ID: 8199074, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr2-2_0363
Gene description
Protein required for the assembly of box H/ACA snoRNPs and for pre-rRNA processing
Locus tag
PAS_chr2-2_0363
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr2-2_0363 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_012964.1 (1708811..1710484, complement)

Chromosome 2 - NC_012964.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene DNA-binding protein of the mitochondria involved in repair of mitochondrial DNA Neighboring gene Meiosis-specific transcription factor Neighboring gene Essential protein of unknown function

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012964.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in box H/ACA snoRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sno(s)RNA-containing ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein required for the assembly of box H/ACA snoRNPs and for pre-rRNA processing

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012964.1 Reference assembly

    Range
    1708811..1710484 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002491778.1 → XP_002491823.1  Protein required for the assembly of box H/ACA snoRNPs and for pre-rRNA processing [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002491823.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R219, F2QRP8
    Conserved Domains (2) summary
    pfam04410
    Location:181 → 326
    Gar1; Gar1/Naf1 RNA binding region
    cl25764
    Location:390 → 556
    PAT1; Topoisomerase II-associated protein PAT1
Nucleotide Protein
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