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PIP5K5 phosphatidylinositol- 4-phosphate 5-kinase 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818720, updated on 18-Sep-2024

Summary

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Official Symbol
PIP5K5
Official Full Name
phosphatidylinositol- 4-phosphate 5-kinase 5
Primary source
TAIR:AT2G41210
Locus tag
AT2G41210
See related
Araport:AT2G41210
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
phosphatidylinositol- 4-phosphate 5-kinase 5; T3K9.2; T3K9_2
Summary
Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.
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Genomic context

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Location:
chromosome: 2
Exon count:
8
Sequence:
Chromosome: 2; NC_003071.7 (17173374..17176866)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene uncharacterized protein Neighboring gene glutamate synthase 2 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Type B phosphatidylinositol-4-phosphate 5-kinases mediate Arabidopsis and Nicotiana tabacum pollen tube growth by regulating apical pectin secretion. Ischebeck T, et al. Plant Cell, 2008 Dec. PMID 19060112, Free PMC Article
  2. The Arabidopsis Phosphatidylinositol Phosphate 5-Kinase PIP5K3 is a key regulator of root hair tip growth. Kusano H, et al. Plant Cell, 2008 Feb. PMID 18281506, Free PMC Article
  3. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
  4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables 1-phosphatidylinositol-4-phosphate 5-kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within phosphatidylinositol metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within plant-type cell wall modification IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within pollen germination IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within pollen tube growth IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in pollen tube IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol- 4-phosphate 5-kinase 5
NP_181654.1
  • phosphatidylinositol- 4-phosphate 5-kinase 5 (PIP5K5); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidyl inositol monophosphate 5 kinase 4 (TAIR:AT3G56960.1); Has 28370 Blast hits to 7831 proteins in 606 species: Archae - 2; Bacteria - 4383; Metazoa - 4412; Fungi - 450; Plants - 2408; Viruses - 2; Other Eukaryotes - 16713 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    17173374..17176866
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129686.2 → NP_181654.1  phosphatidylinositol- 4-phosphate 5-kinase 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181654.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SLG9
    UniProtKB/TrEMBL
    A0A178VQ77, A0A7G2EJ51
    Conserved Domains (1) summary
    PLN03185
    Location:66 → 768
    PLN03185; phosphatidylinositol phosphate kinase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SLG9.1

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