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ORP1A OSBP(oxysterol binding protein)-related protein 1A [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817653, updated on 15-Oct-2023

Summary

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Gene symbol
ORP1A
Gene description
OSBP(oxysterol binding protein)-related protein 1A
Primary source
Araport:AT2G31020
Locus tag
AT2G31020
See related
TAIR:AT2G31020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F7F1.23; F7F1_23; OSBP(oxysterol binding protein)-related protein 1A
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Genomic context

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See ORP1A in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Sequence:
Chromosome: 2; NC_003071.7 (13201350..13204948)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Protein kinase superfamily protein Neighboring gene uncharacterized protein Neighboring gene OSBP(oxysterol binding protein)-related protein 1B Neighboring gene ATP synthase protein I-like protein Neighboring gene oxysterol-binding-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_128656.3

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
OSBP(oxysterol binding protein)-related protein 1A
NP_180659.2
  • OSBP(oxysterol binding protein)-related protein 1A (ORP1A); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1C (TAIR:AT4G08180.1); Has 2870 Blast hits to 2614 proteins in 228 species: Archae - 2; Bacteria - 10; Metazoa - 1527; Fungi - 710; Plants - 301; Viruses - 8; Other Eukaryotes - 312 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    13201350..13204948
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128656.3 → NP_180659.2  OSBP(oxysterol binding protein)-related protein 1A [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VQE1, A0A2H1ZE51, A0A384KLT5, A0A7G2EGG8
    Conserved Domains (2) summary
    cd13294
    Location:91 → 229
    PH_ORP_plant; Plant Oxysterol binding protein related protein Pleckstrin homology (PH) domain
    pfam01237
    Location:411 → 756
    Oxysterol_BP; Oxysterol-binding protein
Nucleotide Protein
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