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Transcriptional factor B3 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817005, updated on 18-Sep-2024

Summary

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Official Full Name
Transcriptional factor B3 family protein
Primary source
TAIR:AT2G24690
Locus tag
AT2G24690
See related
Araport:AT2G24690
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F25P17.1; F25P17_1
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Genomic context

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Location:
chromosome: 2
Exon count:
10
Sequence:
Chromosome: 2; NC_003071.7 (10498972..10503188, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene AP2/B3-like transcriptional factor family protein Neighboring gene uncharacterized protein Neighboring gene BTB/POZ domain protein Neighboring gene Protein of unknown function (PD694200)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_128030.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Transcriptional factor B3 family protein
NP_180045.5
  • Transcriptional factor B3 family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: DNA binding;DNA binding;sequence-specific DNA binding transcription factors (TAIR:AT2G24650.1); Has 627 Blast hits to 195 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 10; Plants - 615; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    10498972..10503188 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001335960.1 → NP_001324643.1  Transcriptional factor B3 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B0R0, A0A5S9X115

  2. NM_128030.5 → NP_180045.5  Transcriptional factor B3 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180045.5

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IQL4, Q8S8E8
    UniProtKB/TrEMBL
    A0A654EVS6
    Conserved Domains (1) summary
    smart01019
    Location:97 → 190
    B3; B3 DNA binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8S8E8.2

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