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PF3D7_1309700 vacuolar protein sorting-associated protein 18, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 814032, updated on 12-Sep-2024

Summary

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Gene symbol
PF3D7_1309700
Gene description
vacuolar protein sorting-associated protein 18, putative
Locus tag
PF3D7_1309700
See related
PlasmoDB:PF3D7_1309700; VEuPathDB:PF3D7_1309700
Gene type
protein coding
RNA name
vacuolar protein sorting-associated protein 18, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
Orthologs
all
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Genomic context

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Location:
chromosome: 13
Exon count:
1
Sequence:
Chromosome: 13; NC_004331.3 (440265..445283)

Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene H/ACA ribonucleoprotein complex subunit 1, putative Neighboring gene ribosomal RNA methyltransferase, putative Neighboring gene conserved protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004331.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
vacuolar protein sorting-associated protein 18, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004331.3 Reference assembly

    Range
    440265..445283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001349789.1 → XP_001349825.1  vacuolar protein sorting-associated protein 18, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001349825.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0L1I6D7, A0A2I0BWP2, Q8IEL8
    Conserved Domains (4) summary
    cl17507
    Location:812 → 868
    LbR-like; Left-handed beta-roll, including virulence factors and various other proteins
    cd16689
    Location:1562 → 1592
    RING-H2_Vps18; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 18 (Vps18) and similar proteins
    pfam05131
    Location:566 → 646
    Pep3_Vps18; Pep3/Vps18/deep orange family
    cl22851
    Location:1537 → 1607
    PHD_SF; PHD finger superfamily
Nucleotide Protein
Heading Accession and Version

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