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TSTA_071090 mating-type switch/DNA repair protein Swi10/Rad10, putative [ Talaromyces stipitatus ATCC 10500 ]

Gene ID: 8107614, updated on 17-May-2024

Summary

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Gene symbol
TSTA_071090
Gene description
mating-type switch/DNA repair protein Swi10/Rad10, putative
Primary source
FungiDB:TSTA_071090
Locus tag
TSTA_071090
See related
VEuPathDB:TSTA_071090
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Talaromyces stipitatus ATCC 10500 (strain: ATCC 10500, culture-collection: ATCC:10500, type-material: type material of Talaromyces stipitatus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces; Talaromyces sect. Talaromyces
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Genomic context

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See TSTA_071090 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_002990113.1Genomic Context describing neighboring genes Neighboring gene fungal specific transcription factor, putative Neighboring gene progesterone binding protein, putative Neighboring gene ribosome biogenesis (Nop4), putative Neighboring gene uncharacterized protein Neighboring gene longevity-assurance protein (LAC1), putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002990113.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UV-damage excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in meiotic mismatch repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ERCC4-ERCC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nucleotide-excision repair factor 1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mating-type switch/DNA repair protein Swi10/Rad10, putative
XP_002341093.1
  • encoded by transcript TSTA_071090A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002990113.1 Reference assembly

    Range
    3223252..3224238
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002341052.1 → XP_002341093.1  mating-type switch/DNA repair protein Swi10/Rad10, putative [Talaromyces stipitatus ATCC 10500]

    See identical proteins and their annotated locations for XP_002341093.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8LUD3
    Conserved Domains (2) summary
    pfam03834
    Location:38 → 133
    Rad10; Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
    pfam14520
    Location:165 → 211
    HHH_5; Helix-hairpin-helix domain
Nucleotide Protein
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