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TSTA_054610 WD repeat protein [ Talaromyces stipitatus ATCC 10500 ]

Gene ID: 8100399, updated on 17-May-2024

Summary

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Gene symbol
TSTA_054610
Gene description
WD repeat protein
Primary source
FungiDB:TSTA_054610
Locus tag
TSTA_054610
See related
VEuPathDB:TSTA_054610
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Talaromyces stipitatus ATCC 10500 (strain: ATCC 10500, culture-collection: ATCC:10500, type-material: type material of Talaromyces stipitatus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces; Talaromyces sect. Talaromyces
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Genomic context

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See TSTA_054610 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_002990120.1Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme (UbcA), putative Neighboring gene cyclin Ccl1, putative Neighboring gene DUF803 domain membrane protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002990120.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Repeated regions

  • Loc: 693462-693514 rpt_type = tandem , rpt_unit_seq = atg , satellite = microsatellite

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA double-strand break processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat protein
XP_002487062.1
  • encoded by transcript TSTA_054610A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002990120.1 Reference assembly

    Range
    693252..695143
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002487017.1 → XP_002487062.1  WD repeat protein [Talaromyces stipitatus ATCC 10500]

    See identical proteins and their annotated locations for XP_002487062.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8MR56
    Conserved Domains (3) summary
    COG2319
    Location:211 → 424
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:104 → 155
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:96 → 426
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials