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TSTA_098890 ribulose-phosphate 3-epimerase [ Talaromyces stipitatus ATCC 10500 ]

Gene ID: 8099717, updated on 17-May-2024

Summary

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Gene symbol
TSTA_098890
Gene description
ribulose-phosphate 3-epimerase
Primary source
FungiDB:TSTA_098890
Locus tag
TSTA_098890
See related
VEuPathDB:TSTA_098890
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Talaromyces stipitatus ATCC 10500 (strain: ATCC 10500, culture-collection: ATCC:10500, type-material: type material of Talaromyces stipitatus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces; Talaromyces sect. Talaromyces
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Genomic context

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See TSTA_098890 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_002990119.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002990119.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-ribulose-phosphate 3-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribulose-phosphate 3-epimerase
XP_002485872.1
  • encoded by transcript TSTA_098890A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002990119.1 Reference assembly

    Range
    479297..482110
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002485827.1 → XP_002485872.1  ribulose-phosphate 3-epimerase [Talaromyces stipitatus ATCC 10500]

    See identical proteins and their annotated locations for XP_002485872.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8MLR2
    Conserved Domains (1) summary
    cl21457
    Location:5 → 249
    TIM_phosphate_binding; TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure. Specific for this family is the conserved phosphate binding site at the edges of strands 7 and 8. The phosphate ...
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials