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LOC8083415 homeobox-leucine zipper protein ROC6 [ Sorghum bicolor (sorghum) ]

Gene ID: 8083415, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8083415
Gene description
homeobox-leucine zipper protein ROC6
Locus tag
SORBI_3006G020700
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 6 NC_012875.2 (3556642..3572162)

Chromosome 6 - NC_012875.2Genomic Context describing neighboring genes Neighboring gene 3-ketoacyl-CoA synthase 6 Neighboring gene 3-ketoacyl-CoA synthase 6-like Neighboring gene uncharacterized LOC8067727 Neighboring gene probable flavin-containing monooxygenase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012875.2 Chromosome 6 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox-leucine zipper protein ROC6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012875.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    3556642..3572162
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021463021.1 → XP_021318696.1  homeobox-leucine zipper protein ROC6

    UniProtKB/TrEMBL
    A0A1B6PJJ0
    Conserved Domains (3) summary
    cd08875
    Location:255 → 484
    START_ArGLABRA2_like; C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins
    pfam00046
    Location:101 → 151
    Homeobox; Homeobox domain
    cl27820
    Location:63 → 169
    Abdominal-A; Homeobox protein
Nucleotide Protein
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Molecular Biology Databases