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LOC8057825 protein-L-isoaspartate O-methyltransferase 1 [ Sorghum bicolor (sorghum) ]

Gene ID: 8057825, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8057825
Gene description
protein-L-isoaspartate O-methyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 7 NC_012876.2 (60697783..60700705, complement)

Chromosome 7 - NC_012876.2Genomic Context describing neighboring genes Neighboring gene GTP-binding protein SAR1A Neighboring gene 28 kDa ribonucleoprotein, chloroplastic Neighboring gene protein tas Neighboring gene thiol protease SEN102

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012876.2 Chromosome 7 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-L-isoaspartate (D-aspartate) O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-L-isoaspartate O-methyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012876.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    60697783..60700705 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021464750.1 → XP_021320425.1  protein-L-isoaspartate O-methyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam01135
    Location:39 → 247
    PCMT; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)

  2. XM_002445655.2 → XP_002445700.1  protein-L-isoaspartate O-methyltransferase 1 isoform X2

    See identical proteins and their annotated locations for XP_002445700.1

    Conserved Domains (2) summary
    pfam01135
    Location:14 → 222
    PCMT; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
    cl17173
    Location:14 → 222
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

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