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LOC8051457 eukaryotic translation initiation factor 4E type 2 [ Ixodes scapularis (black-legged tick) ]

Gene ID: 8051457, updated on 31-Jul-2024

Summary

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Gene symbol
LOC8051457
Gene description
eukaryotic translation initiation factor 4E type 2
See related
VectorBase:ISCP_003389; EnsemblRapid:LOC8051457
Gene type
protein coding
RefSeq status
MODEL
Organism
Ixodes scapularis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
103 current ASM1692078v2 (GCF_016920785.2) Unplaced Scaffold NW_024609880.1 (53616453..53638403)
102 previous assembly Ixodes_scapularus_ComboLowHiFi (GCF_016920785.1) Unplaced Scaffold NW_024389493.1 (266255..288234, complement)

NW_024609880.1Genomic Context describing neighboring genes Neighboring gene Matrix metalloproteinase 1 Neighboring gene beta-galactoside alpha-2,6-sialyltransferase 2 Neighboring gene BRCA1-associated RING domain protein 1 Neighboring gene uncharacterized LOC8053353

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA 7-methylguanosine cap binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of eukaryotic translation initiation factor 4F complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 4E type 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ixodes scapularis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1692078v2

Genomic

  1. NW_024609880.1 Reference ASM1692078v2

    Range
    53616453..53638403
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029969049.3 → XP_029824909.1  eukaryotic translation initiation factor 4E type 2

    UniProtKB/TrEMBL
    A0A4D5SB61
    Related
    XP_029824909.1, XM_029969049.3
    Conserved Domains (1) summary
    pfam01652
    Location:17 → 175
    IF4E; Eukaryotic initiation factor 4E

  2. XM_029969055.4 → XP_029824915.1  eukaryotic translation initiation factor 4E type 2

    UniProtKB/TrEMBL
    A0A4D5SB61
    Related
    XP_029824915.1, XM_029969055.4
    Conserved Domains (1) summary
    pfam01652
    Location:17 → 175
    IF4E; Eukaryotic initiation factor 4E

  3. XM_040206410.2 → XP_040062344.1  eukaryotic translation initiation factor 4E type 2

    UniProtKB/TrEMBL
    A0A4D5SB61
    Related
    XP_040062344.1, XM_040206410.2
    Conserved Domains (1) summary
    pfam01652
    Location:17 → 175
    IF4E; Eukaryotic initiation factor 4E

  4. XM_029969067.2 → XP_029824927.1  eukaryotic translation initiation factor 4E type 2

    UniProtKB/TrEMBL
    A0A4D5SB61
    Related
    XP_029824927.1, XM_029969067.2
    Conserved Domains (1) summary
    pfam01652
    Location:17 → 175
    IF4E; Eukaryotic initiation factor 4E
Nucleotide Protein
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