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CD36_63170 RNA-processing protein, putative [ Candida dubliniensis CD36 ]

Gene ID: 8048600, updated on 17-May-2024

Summary

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Gene symbol
CD36_63170
Gene description
RNA-processing protein, putative
Primary source
FungiDB:CD36_63170
Locus tag
CD36_63170
See related
VEuPathDB:CD36_63170
Gene type
protein coding
RNA name
RNA-processing protein, putative
RefSeq status
PROVISIONAL
Organism
Candida dubliniensis CD36 (strain: CD36)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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Genomic context

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See CD36_63170 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Sequence:
Chromosome: 6; NC_012865.1 (598765..599682, complement)

Chromosome 6 - NC_012865.1Genomic Context describing neighboring genes Neighboring gene inner nuclear membrane (INM) protein, putative Neighboring gene hypothetical protein Neighboring gene lipoate biosynthesis protein, putative Neighboring gene 3-hydroxyisobutyrate dehydrogenase, mitochondrial precursor, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012865.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans. Jackson AP, et al. Genome Res, 2009 Dec. PMID 19745113, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribonuclease P RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA 5'-leader removal IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ribonuclease MRP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonuclease P complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
RNA-processing protein, putative
subunit of RNase MRP and of nuclear RNase P, putative
XP_002421053.1
  • Similar to S. cerevisiae POP4;
    In S. cerevisiae: subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P, which cleaves tRNA precursors to generate mature 5' ends; binds to the RPR1 RNA subunit in Rnase P

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012865.1 Reference assembly

    Range
    598765..599682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002421008.1 → XP_002421053.1  RNA-processing protein, putative [Candida dubliniensis CD36]

    See identical proteins and their annotated locations for XP_002421053.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B9WIZ1
    Conserved Domains (1) summary
    pfam01868
    Location:186 → 294
    UPF0086; Domain of unknown function UPF0086
Nucleotide Protein
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